Skip to content
Sections
>> Trisquel >> 套件 >> aramo >> science >> readucks
aramo  ]
[ 原始碼: readucks  ]

套件: readucks (0.0.3-3)

Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)

This package is inspired by the demultiplexing options in porechop but without the adapter trimming options - it just demuxes. It uses the parasail library with its Python bindings to do pairwise alignment which provides a considerable speed up over the seqan library used by porechop due to its low-level use of vector processor instructions.

其他與 readucks 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biopython
    Python3 library for bioinformatics
  • dep: python3-parasail
    Python3 bindings for the parasail C library

下載 readucks

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
all 20.8 kB106 kB [文件列表]