Skip to content
Sections
>> Trisquel >> 套件 >> etiona >> science >> metastudent
etiona  ] [  nabia  ] [  aramo  ]
[ 原始碼: metastudent  ]

套件: metastudent (2.0.1-5)

predictor of Gene Ontology terms from protein sequence

Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).

All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.

其他與 metastudent 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: blast2
    transitional dummy package to ncbi-blast+-legacy
  • dep: default-jre
    Standard Java or Java compatible Runtime
  • dep: libfile-chdir-perl
    more sensible way to change directories
  • dep: libgo-perl (>= 0.15-3)
    perl modules for GO and other OBO ontologies
  • dep: libgraphviz-perl
    Perl interface to the GraphViz graphing tool
  • dep: libipc-run-perl
    Perl module for running processes
  • dep: metastudent-data (>= 2.0.0)
    predictor of Gene Ontology terms from protein sequence - data files
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python
    interactive high-level object-oriented language (default version)

下載 metastudent

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
all 5,845.1 kB94983 kB [文件列表]