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[ 原始碼： discosnp ]
套件： discosnp (1.2.6-2)
discosnp 的相關超連結
Trisquel 的資源：
下載原始碼套件 discosnp：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Olivier Sallou
- Andreas Tille
外部的資源：
- 主頁 [colibread.inria.fr]
相似套件：
discovering Single Nucleotide Polymorphism from raw set(s) of reads
Software discoSnp is designed for discovering Single Nucleotide Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation Sequencers (NGS).
Note that number of input read sets is not constrained, it can be one, two, or more. Note also that no other data as reference genome or annotations are needed.
The software is composed by two modules. First module, kissnp2, detects SNPs from read sets. A second module, kissreads, enhance the kissnp2 results by computing per read set and for each found SNP:
1) its mean read coverage 2) the (phred) quality of reads generating the polymorphism.
This program is superseded by DiscoSnp++.
其他與 discosnp 有關的套件
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- dep: bc
- GNU bc arbitrary precision calculator language
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: zlib1g (>= 1:1.2.3.4)
- compression library - runtime