[ etiona ]
[ aramo ]
[ 原始碼： python-cogent ]
套件： python-cogent (1.9-11build1)
python-cogent 的相關超連結
Trisquel 的資源：
下載原始碼套件 python-cogent：
- [python-cogent_1.9-11build1.dsc]
- [python-cogent_1.9.orig.tar.gz]
- [python-cogent_1.9-11build1.debian.tar.xz]
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Steffen Moeller
- Andreas Tille
- Thorsten Alteholz
外部的資源：
- 主頁 [pycogent.org]
相似套件：
framework for genomic biology
PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for:
* controlling third-party applications, * devising workflows; querying databases, * conducting novel probabilistic analyses of biological sequence evolution, and * generating publication quality graphics.It is distinguished by many unique built-in capabilities (such as true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data.
其他與 python-cogent 有關的套件
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: python
- interactive high-level object-oriented language (default version)
- dep: python (<< 2.8)
- dep: python (>= 2.7~)
-
- dep: python-matplotlib
- Python based plotting system in a style similar to Matlab
-
- dep: python-numpy (>= 1:1.10.0~b1)
- Numerical Python adds a fast array facility to the Python language
-
- dep: python-numpy-abi9
- 本虛擬套件由這些套件提供： python-numpy
-
- rec: blast2
- transitional dummy package to ncbi-blast+-legacy
-
- rec: bwa
- Burrows-Wheeler Aligner
-
- rec: cd-hit
- suite of programs designed to quickly group sequences
-
- rec: clearcut
- extremely efficient phylogenetic tree reconstruction
-
- rec: dialign
- Segment-based multiple sequence alignment
-
- rec: muscle
- Multiple alignment program of protein sequences
-
- sug: cdbfasta
- Constant DataBase indexing and retrieval tools for multi-FASTA files
-
- sug: clustalw
- global multiple nucleotide or peptide sequence alignment
-
- sug: fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
-
- sug: infernal
- inference of RNA secondary structural alignments
-
- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- sug: mothur
- sequence analysis suite for research on microbiota
-
- sug: parsinsert
- Parsimonious Insertion of unclassified sequences into phylogenetic trees
-
- sug: python-cogent-doc
- docs for python-cogent
-
- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
-
- sug: rdp-classifier
- extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
-
- sug: rtax
- Classification of sequence reads of 16S ribosomal RNA gene