[ etiona ]
[ 原始碼： tophat ]
套件： tophat (2.1.1+dfsg1-1)
tophat 的相關超連結
Trisquel 的資源：
下載原始碼套件 tophat：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Carlos Borroto
- Alexandre Mestiashvili
- Andreas Tille
外部的資源：
- 主頁 [ccb.jhu.edu]
相似套件：
fast splice junction mapper for RNA-Seq reads
TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. TopHat is a collaborative effort between the University of Maryland Center for Bioinformatics and Computational Biology and the University of California, Berkeley Departments of Mathematics and Molecular and Cell Biology.
其他與 tophat 有關的套件
|
|
|
-
- dep: libboost-system1.65.1
- Operating system (e.g. diagnostics support) library
-
- dep: libboost-thread1.65.1
- portable C++ multi-threading
-
- dep: libc6 (>= 2.15)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: samtools (>= 1.5)
- processing sequence alignments in SAM and BAM formats
-
- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
-
- sug: cufflinks
- 套件暫時不可用