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[ 原始碼: chemfp  ]

套件: python-chemfp (1.1p1-2.1)

cheminformatics fingerprints file formats and tools

Chem-fingerprints is a set of formats and related tools for the storage, exchange, and search of cheminformatics fingerprint data sets.

It translates fingerprints from the OpenBabel and RDKIT and cheminformatics packages (as well as the proprietary OEChem package) into the binary FPS format.

Besides Python modules, it provides the following tools:

 * sdf2fps - Extract fingerprint data from SD tags
 * ob2fps - Use OpenBabel to generate fingerprints from structures
 * rdkit2fps - Use RDKit to generate fingerprints from structures
 * oe2fps - Use OEChem/OEGraphSim to generate fingerprints from structures
 * simsearch - Do threshold or k-nearest neighbor Tanimoto similarity searches
   between two FPS files

其他與 python-chemfp 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.4)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: python (<< 2.8)
    interactive high-level object-oriented language (default version)
    dep: python (>= 2.7)
  • rec: python-openbabel
    Chemical toolbox library (python bindings)
  • rec: python-rdkit
    Collection of cheminformatics and machine-learning software

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硬體架構 套件大小 安裝後大小 檔案
i386 157.8 kB803 kB [文件列表]