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[ 原始碼: libgkarrays  ]

套件: libgkarrays1 (2.1.0+dfsg-1)

library to query large collection of NGS sequences

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

其他與 libgkarrays1 有關的套件

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  • 推薦
  • 建議
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

下載 libgkarrays1

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 47.6 kB145 kB [文件列表]
i386 59.5 kB172 kB [文件列表]