套件： libjellyfish-perl (2.2.8-3build1)
libjellyfish-perl 的相關超連結
Trisquel 的資源：
下載原始碼套件 jellyfish：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Shaun Jackman
- Andreas Tille
- Michael R. Crusoe
外部的資源：
- 主頁 [www.cbcb.umd.edu]
相似套件：
count k-mers in DNA sequences (Perl bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the Perl bindings of jellyfish.
其他與 libjellyfish-perl 有關的套件
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libjellyfish-2.0-2
- count k-mers in DNA sequences (dynamic library of jellyfish)
-
- dep: perl (>= 5.26.1-5)
- Larry Wall's Practical Extraction and Report Language
-
- dep: perlapi-5.26.1
- 本虛擬套件由這些套件提供： perl-base