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[ 原始碼: theseus  ]

套件: theseus (3.3.0-6)

theseus 的相關超連結

theseus

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下載原始碼套件 theseus

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superimpose macromolecules using maximum likelihood

Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments.

When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data.

其他與 theseus 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: clustalo
    General purpose multiple sequence alignment program for proteins
  • dep: libc6 (>= 2.15) [i386]
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
    dep: libc6 (>= 2.22) [amd64]
  • dep: libgsl23
    GNU Scientific Library (GSL) -- library package
  • dep: libgslcblas0
    GNU Scientific Library (GSL) -- blas library package
  • dep: muscle
    Multiple alignment program of protein sequences
  • sug: clustalw
    global multiple nucleotide or peptide sequence alignment
  • sug: dialign
    Segment-based multiple sequence alignment
  • sug: kalign
    Global and progressive multiple sequence alignment
  • sug: mafft
    Multiple alignment program for amino acid or nucleotide sequences
  • sug: probcons
    PROBabilistic CONSistency-based multiple sequence alignment
  • sug: t-coffee
    Multiple Sequence Alignment
  • sug: theseus-examples
    superimpose macromolecules using maximum likelihood (examples)

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下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 416.2 kB1083 kB [文件列表]
i386 288.6 kB845 kB [文件列表]