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[ 原始碼: ltrsift  ]

套件: ltrsift (1.0.2-8)

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

其他與 ltrsift 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.7)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libcairo2 (>= 1.2.4)
    Cairo 2D vector graphics library
  • dep: libgdk-pixbuf2.0-0 (>= 2.22.0)
    GDK Pixbuf library
  • dep: libgenometools0
    versatile genome analysis library
  • dep: libglib2.0-0 (>= 2.35.9)
    GLib library of C routines
  • dep: libgtk2.0-0 (>= 2.18.0)
    GTK graphical user interface library - old version
  • dep: libpango-1.0-0 (>= 1.14.0)
    Layout and rendering of internationalized text
  • rec: last-align
    genome-scale comparison of biological sequences
  • rec: ncbi-blast+
    next generation suite of BLAST sequence search tools

下載 ltrsift

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 106.4 kB371 kB [文件列表]