[ 原始碼： murasaki ]
套件： murasaki-mpi (1.68.6-9build2)
murasaki-mpi 的相關超連結
Trisquel 的資源：
下載原始碼套件 murasaki：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Andreas Tille
外部的資源：
- 主頁 [murasaki.dna.bio.keio.ac.jp]
相似套件：
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
其他與 murasaki-mpi 有關的套件
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- dep: libboost-filesystem1.71.0
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.71.0
- Boost.Iostreams Library
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- dep: libboost-regex1.71.0-icu66
- 本虛擬套件由這些套件提供： libboost-regex1.71.0
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libopenmpi3 (>= 4.0.3~rc4)
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: murasaki-common
- homology detection tool across multiple large genomes (common files)