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[ 原始碼: ssake  ]

套件: ssake (4.0-3)

ssake 的相關超連結

ssake

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下載原始碼套件 ssake

維護者:

Original Maintainers:

  • Debian Med Packaging Team (郵件存檔)
  • Andreas Tille
  • Charles Plessy

外部的資源:

相似套件:

genomics application for assembling millions of very short DNA sequences

The Short Sequence Assembly by K-mer search and 3′ read Extension (SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to help leverage the information from short sequences reads by stringently clustering them into contigs that can be used to characterize novel sequencing targets.

其他與 ssake 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libperl4-corelibs-perl
    libraries historically supplied with Perl 4
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • sug: ssake-examples
    example data for SSAKE, a genomic assembler of short reads

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