[ 原始碼： stacks ]
套件： stacks (2.41+dfsg-1build3)
stacks 的相關超連結
Trisquel 的資源：
下載原始碼套件 stacks：
- [stacks_2.41+dfsg-1build3.dsc]
- [stacks_2.41+dfsg.orig.tar.xz]
- [stacks_2.41+dfsg-1build3.debian.tar.xz]
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Tim Booth
- Andreas Tille
外部的資源：
- 主頁 [creskolab.uoregon.edu]
相似套件：
pipeline for building loci from short-read DNA sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>
其他與 stacks 有關的套件
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
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- dep: libdbi-perl
- Perl Database Interface (DBI)
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
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- rec: libspreadsheet-writeexcel-perl
- module to create Excel spreadsheets
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- rec: python3
- interactive high-level object-oriented language (default python3 version)