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[ 原始碼: pbsuite  ]

套件: pbjelly (15.8.24+dfsg-4)

genome assembly upgrading tool

PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft assembles. PBJelly fills or reduces as many captured gaps as possible to produce upgraded draft genomes.

PBJelly is part of the PBSuite.

其他與 pbjelly 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: blasr (>= 5.3)
    mapping single-molecule sequencing reads
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-networkx
    tool to create, manipulate and study complex networks (Python3)
  • dep: python3-pbsuite-utils (= 15.8.24+dfsg-4)
    software for Pacific Biosciences sequencing data -- Python utilities

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