套件： physamp (1.1.0-1build1)

physamp 的相關超連結

Trisquel 的資源：

下載原始碼套件 physamp：

維護者：

Debian Med Packaging Team (郵件存檔)

Original Maintainers:

Debian Med Packaging Team (郵件存檔)
Andreas Tille
Julien Dutheil

外部的資源：

主頁 [jydu.github.io]

相似套件：

sample sequence alignment corresponding to phylogeny

The PhySamp package currently contains two programs: bppphysamp, which samples sequences according to their similarity, and bppalnoptim, which samples a sequence alignment by removing sequences in order to maximize the number of sites suitable for a given analysis. The bppalnoptim program has three running modes:

 * Interactive: the user will be iteratively proposed a set of choices
   for sequence removal, with their corresponding site gains. The
   procedure stops when the user does not want to remove more sequences,
   and the resulting filtered alignment is written.
 * Automatic: the user enters an a priori criterion for stopping
   the filtering procedure (for instance a minimum number of
   sequences to keep).
 * Diagnostic: this mode allows one to plot the trade-off curve, by
   showing the site gain as a function of the number of removed
   sequences.

其他與 physamp 有關的套件

依賴

推薦

建議

dep: libbpp-core4 (>= 2.4.1)

Bio++ Core library
dep: libbpp-phyl12 (>= 2.4.1)

Bio++ Phylogenetic library
dep: libbpp-seq12 (>= 2.4.1)

Bio++ Sequence library
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
dep: libgcc-s1 (>= 3.5)

GCC support library
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3

下載 physamp

下載可用於所有硬體架構的
硬體架構	套件大小	安裝後大小	檔案
armhf	269.6 kB	415 kB	[文件列表]

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