Skip to content
Sections
>> Trisquel >> 套件 >> nabia >> science >> tophat-recondition
nabia  ] [  aramo  ]
[ 原始碼: tophat-recondition  ]

套件: tophat-recondition (1.4-1)

post-processor for TopHat unmapped reads

tophat-recondition is a post-processor for TopHat unmapped reads (contained in unmapped.bam), making them compatible with downstream tools (e.g., the Picard suite, samtools, GATK) (TopHat issue #17). It also works around bugs in TopHat:

 * the "mate is unmapped" SAM flag is not set on any reads in the
   unmapped.bam file (TopHat issue #3)
 * the mapped mate of an unmapped read can be absent from
   accepted_hits.bam, creating a mismatch between the file and the unmapped
   read's flags (TopHat issue #16)

其他與 tophat-recondition 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • sug: tophat2
    套件暫時不可用

下載 tophat-recondition

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
all 9.2 kB34 kB [文件列表]