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[ 原始碼: virulencefinder  ]

套件: virulencefinder (2.0.3+git20190809.dde157a-1)

identify virulence genes in total or partial sequenced isolates of bacteria

The VirulenceFinder service contains one Python script virulencefinder.py which is the script of the latest version of the VirulenceFinder service. VirulenceFinder identifies viruelnce genes in total or partial sequenced isolates of bacteria - at the moment only E. coli, Enterococcus, S. aureus and Listeria are available.

其他與 virulencefinder 有關的套件

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  • 建議
  • dep: kma
    mapping genomic sequences to raw reads directly against redundant databases
  • dep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-cgecore
    Python3 module for the Center for Genomic Epidemiology
  • dep: python3-tabulate
    pretty-print tabular data in Python3

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