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[ 原始碼: bandage  ]

套件: bandage (0.8.1-1build1)

bandage 的相關超連結

bandage

Trisquel 的資源:

下載原始碼套件 bandage

維護者:

Original Maintainers:

  • Debian Med Packaging Team (郵件存檔)
  • Cédric Lood
  • Andreas Tille

外部的資源:

相似套件:

Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Bandage is a GUI program that allows users to interact with the assembly graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and others.

De novo assembly graphs contain not only assembled contigs but also the connections between those contigs, which were previously not easily accessible. Bandage visualises assembly graphs, with connections, using graph layout algorithms. Nodes in the drawn graph, which represent contigs, can be automatically labelled with their ID, length or depth. Users can interact with the graph by moving, labelling and colouring nodes. Sequence information can also be extracted directly from the graph viewer. By displaying connections between contigs, Bandage opens up new possibilities for analysing and improving de novo assemblies that are not possible by looking at contigs alone.

More information and download links are on the Bandage website: rrwick.github.io/Bandage

The package is relevant to the field of genome assembly and will be maintained by the Debian Med team.

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下載 bandage

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 941.0 kB2306 kB [文件列表]
armhf 851.9 kB1601 kB [文件列表]