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[ 原始碼: blasr  ]

套件: blasr (5.3.3+dfsg-4build1)

mapping single-molecule sequencing reads

Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. Such reads are thousands of bases long, with divergence between them and the genome being dominated by insertion and deletion error.

其他與 blasr 有關的套件

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  • 建議
  • dep: libblasr (>= 5.3.3+dfsg)
    tools for aligning PacBio reads to target sequences
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libhdf5-cpp-103 (>= 1.10.1)
    Hierarchical Data Format 5 (HDF5) - C++ libraries
  • dep: libpbbam1.0.6 (>= 1.0.6+dfsg)
    Pacific Biosciences binary alignment/map (BAM) library
  • dep: libpbcopper1.3.0 (>= 1.3.0+dfsg)
    data structures, algorithms, and utilities for C++ applications
  • dep: libpbseq
    library for analyzing PacBio sequencing data
  • dep: libstdc++6 (>= 9)
    GNU Standard C++ Library v3

下載 blasr

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 220.2 kB702 kB [文件列表]