[ 原始碼： bowtie2 ]
套件： bowtie2 (2.3.5.1-6build1)
bowtie2 的相關超連結
Trisquel 的資源：
下載原始碼套件 bowtie2：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Alexandre Mestiashvili
- Andreas Tille
外部的資源：
- 主頁 [bowtie-bio.sourceforge.net]
相似套件：
ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.
Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
其他與 bowtie2 有關的套件
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: libtbb2 (>= 2017~U7)
- parallelism library for C++ - runtime files
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
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- sug: bowtie2-examples
- Examples for bowtie2