套件： clonalframe (1.2-10build1)
clonalframe 的相關超連結
Trisquel 的資源：
下載原始碼套件 clonalframe：
- [clonalframe_1.2-10build1.dsc]
- [clonalframe_1.2.orig.tar.gz]
- [clonalframe_1.2-10build1.debian.tar.xz]
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Andreas Tille
外部的資源：
- 主頁 [www.xavierdidelot.xtreemhost.com]
相似套件：
inference of bacterial microevolution using multilocus sequence data
ClonalFrame identifies the clonal relationships between the members of a sample, while also estimating the chromosomal position of homologous recombination events that have disrupted the clonal inheritance.
ClonalFrame can be applied to any kind of sequence data, from a single fragment of DNA to whole genomes. It is well suited for the analysis of MLST data, where 7 gene fragments have been sequenced, but becomes progressively more powerful as the sequenced regions increase in length and number up to whole genomes. However, it requires the sequences to be aligned. If you have genomic data that is not aligned, it is recommend to use Mauve which produces alignment of whole bacterial genomes in exactly the format required for analysis with ClonalFrame.
其他與 clonalframe 有關的套件
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供： libc6-udeb
- dep: libc6 (>= 2.7) [armhf]
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libgsl23 (>= 2.5)
- GNU Scientific Library (GSL) -- library package
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- sug: clonalframeml
- Efficient Inference of Recombination in Whole Bacterial Genomes