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[ 原始碼： cnvkit ]
套件： cnvkit (0.9.6-3)
cnvkit 的相關超連結
Trisquel 的資源：
下載原始碼套件 cnvkit：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Michael R. Crusoe
- Steffen Moeller
- Olivier Sallou
外部的資源：
- 主頁 [cnvkit.readthedocs.org]
相似套件：
Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
其他與 cnvkit 有關的套件
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-future
- Clean single-source support for Python 3 and 2 - Python 3.x
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-pomegranate (>= 0.9.0)
- Fast, flexible and easy to use probabilistic modelling
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- dep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-reportlab
- ReportLab library to create PDF documents using Python3
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: r-bioc-dnacopy
- R package: DNA copy number data analysis