[ nabia ]
[ aramo ]
[ 原始碼: libedlib ]
套件: edlib-aligner (1.2.4-2ubuntu1)
edlib-aligner 的相關超連結
Trisquel 的資源:
下載原始碼套件 libedlib:
維護者:
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Andreas Tille
外部的資源:
- 主頁 [github.com]
相似套件:
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
其他與 edlib-aligner 有關的套件
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
同時作為一個虛擬套件由這些套件提供: libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
-
- dep: libedlib0 (= 1.2.4-2ubuntu1)
- library for sequence alignment using edit distance
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3