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[ 原始碼: pbbam  ]

套件: pbbamtools (1.0.6+dfsg-2build1)

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

其他與 pbbamtools 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libhts3 (>= 1.10)
    C library for high-throughput sequencing data formats
  • dep: libpbbam1.0.6 (= 1.0.6+dfsg-2build1)
    Pacific Biosciences binary alignment/map (BAM) library
  • dep: libpbcopper1.3.0 (>= 1.3.0+dfsg)
    data structures, algorithms, and utilities for C++ applications
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • rec: samtools
    processing sequence alignments in SAM, BAM and CRAM formats

下載 pbbamtools

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硬體架構 套件大小 安裝後大小 檔案
amd64 75.1 kB319 kB [文件列表]