[ aramo ]
[ Source: pairtools ]
Package: python3-pairtools (0.3.0-3.2build1)
Links for python3-pairtools
Trisquel Resources:
Download Source Package pairtools:
- [pairtools_0.3.0-3.2build1.dsc]
- [pairtools_0.3.0.orig.tar.gz]
- [pairtools_0.3.0-3.2build1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Antoni Villalonga
External Resources:
- Homepage [github.com]
Similar packages:
Framework to process sequencing data from a Hi-C experiment
Simple and fast command-line framework to process sequencing data from a Hi-C experiment.
Process pair-end sequence alignments and perform the following operations:
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
Other Packages Related to python3-pairtools
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- dep: cython3
- C-Extensions for Python 3
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.4) [armhf]
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- dep: python3
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- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
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- dep: python3-nose
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- dep: python3-numpy (>= 1:1.20.0)
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- dep: python3-numpy-abi9
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Download python3-pairtools
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 130.0 kB | 441 kB | [list of files] |
| arm64 | 123.5 kB | 404 kB | [list of files] |
| armhf | 118.4 kB | 338 kB | [list of files] |
| ppc64el | 146.8 kB | 540 kB | [list of files] |