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Paketti: sprai (0.9.9.23+dfsg1-2)

single-pass sequencing read accuracy improver

Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.

Muut pakettiin sprai liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.17)
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
  • dep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: time
    GNU time program for measuring CPU resource usage
  • sug: make
    utility for directing compilation
  • sug: pbalign
    Paketti ei saatavilla
  • sug: pbgenomicconsensus
    Paketti ei saatavilla
  • sug: pbh5tools
    Paketti ei saatavilla

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arm64 1,472.5 kt1694 kt [tiedostoluettelo]