[ Source: bitseq ]
Paketti: bitseq (0.7.5+dfsg-5build1)
Links for bitseq
Trisquel-palvelut:
Imuroi lähdekoodipaketti bitseq:
- [bitseq_0.7.5+dfsg-5build1.dsc]
- [bitseq_0.7.5+dfsg.orig.tar.xz]
- [bitseq_0.7.5+dfsg-5build1.debian.tar.xz]
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Tim Booth
- Andreas Tille
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
Bayesian Inference of Transcripts from Sequencing Data
BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.
Muut pakettiin bitseq liittyvät paketit
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Imuroi bitseq
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| amd64 | 341.1 kt | 1903 kt | [tiedostoluettelo] |
| armhf | 289.2 kt | 1106 kt | [tiedostoluettelo] |