Paquet : libfreecontact-perl (0.08-9build1)
Liens pour libfreecontact-perl
Ressources Trisquel :
Télécharger le paquet source libfreecontact-perl :
- [libfreecontact-perl_0.08-9build1.dsc]
- [libfreecontact-perl_0.08.orig.tar.gz]
- [libfreecontact-perl_0.08-9build1.debian.tar.xz]
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Laszlo Kajan
- Andreas Tille
Ressources externes :
- Page d'accueil [rostlab.org]
Paquets similaires :
fast protein contact predictor - binding for Perl
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the Perl binding.
Autres paquets associés à libfreecontact-perl
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: libfreecontact0v5 (>= 1.0.21)
- fast protein contact predictor library
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- dep: libgcc-s1 (>= 3.0) [ppc64el]
- GCC support library
- dep: libgcc-s1 (>= 3.3.1) [amd64, arm64]
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: perlapi-5.34.0
- paquet virtuel fourni par perl-base
Télécharger libfreecontact-perl
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 70,8 ko | 213 ko | [liste des fichiers] |
| arm64 | 69,9 ko | 200 ko | [liste des fichiers] |
| armhf | 69,2 ko | 192 ko | [liste des fichiers] |
| ppc64el | 68,9 ko | 289 ko | [liste des fichiers] |