Paquet : libjellyfish-perl (2.3.0-12ubuntu2)

Liens pour libjellyfish-perl

Ressources Trisquel :

Télécharger le paquet source jellyfish :

Responsable :

Debian Med Packaging Team (Archive du courrier électronique)

Original Maintainers:

Debian Med Packaging Team (Archive du courrier électronique)
Shaun Jackman
Andreas Tille
Michael R. Crusoe
Étienne Mollier

Ressources externes :

Page d'accueil [github.com]

Paquets similaires :

count k-mers in DNA sequences (Perl bindings of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the Perl bindings of jellyfish.

Autres paquets associés à libjellyfish-perl

dépendances

recommandations

suggestions

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
dep: libgcc-s1 (>= 3.3.1) [non armhf]

GCC support library

dep: libgcc-s1 (>= 3.5) [armhf]
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: perlapi-5.34.0

paquet virtuel fourni par perl-base

Télécharger libjellyfish-perl

Télécharger pour toutes les architectures proposées
Architecture	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	54,7 ko	169 ko	[liste des fichiers]
arm64	51,9 ko	157 ko	[liste des fichiers]
armhf	59,3 ko	139 ko	[liste des fichiers]
ppc64el	65,0 ko	229 ko	[liste des fichiers]

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