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[ Paquet source : smrtanalysis ]
Paquet : smrtanalysis-dev (0~20161126)
Liens pour smrtanalysis-dev
Ressources Trisquel :
Télécharger le paquet source smrtanalysis :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Afif Elghraoui
Ressources externes :
- Page d'accueil [www.pacb.com]
Paquets similaires :
develepment libraries for smrtanalysis
SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.
This is a metapackage that depends on the SMRTAnalysis development tools.
Autres paquets associés à smrtanalysis-dev
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- dep: libpbbam-dev
- Pacific Biosciences binary alignment/map (BAM) library (headers)
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- dep: libpbseq-dev
- library for analyzing PacBio sequencing data (development files)
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- dep: python-kineticstools
- detection of DNA modifications (Python 2 library)
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- dep: python-pbalign
- map Pacific Biosciences reads to reference DNA sequences (Python2)
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- dep: python-pbcommand
- common command-line interface for Pacific Biosciences analysis modules
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- dep: python-pbconsensuscore
- algorithms for PacBio multiple sequence consensus -- Python 2
- ou python3-pbconsensuscore
- algorithms for PacBio multiple sequence consensus -- Python 3
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- dep: python-pbcore
- Python library for processing PacBio data files
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- dep: python-pbgenomicconsensus
- Pacific Biosciences variant and consensus caller (Python 2)
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- dep: python-pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library
Télécharger smrtanalysis-dev
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| all | 2,5 ko | 9 ko | [liste des fichiers] |