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Paquet : phybin (0.3-1)

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Autres paquets associés à phybin

  • dépendances
  • recommandations
  • suggestions
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb
  • dep: libffi6 (>= 3.0.4)
    Foreign Function Interface library runtime
  • dep: libgmp10
    Multiprecision arithmetic library

Télécharger phybin

Télécharger pour toutes les architectures proposées
Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 1 608,1 ko12671 ko [liste des fichiers]
i386 1 626,1 ko9926 ko [liste des fichiers]