Package: libhts-dev (1.13+ds-2build1)
Links for libhts-dev
Trisquel Resources:
Download Source Package htslib:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Andreas Tille
- Michael R. Crusoe
- Steffen Moeller
- Étienne Mollier
External Resources:
- Homepage [github.com]
Similar packages:
development files for the HTSlib
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
This package contains development files for the HTSlib: headers, static library, manual pages, etc.
For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix.
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Download libhts-dev
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 5,470.2 kB | 11460 kB | [list of files] |
| arm64 | 5,424.5 kB | 11253 kB | [list of files] |
| armhf | 3,944.1 kB | 5119 kB | [list of files] |
| ppc64el | 5,854.2 kB | 12503 kB | [list of files] |