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Package: libhts-dev (1.7-2)

development files for the HTSlib

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package contains development files for the HTSlib: headers, static library, manual pages, etc.

Other Packages Related to libhts-dev

  • depends
  • recommends
  • suggests
  • dep: libhts2 (= 1.7-2)
    C library for high-throughput sequencing data formats
  • dep: liblzma-dev
    XZ-format compression library - development files

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Architecture Package Size Installed Size Files
amd64 371.9 kB1394 kB [list of files]
i386 396.0 kB1318 kB [list of files]