[ Source: bioperl-run ]
Package: bioperl-run (1.7.1-3)
Links for bioperl-run
Trisquel Resources:
Download Source Package bioperl-run:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Andreas Tille
External Resources:
- Homepage [search.cpan.org]
Similar packages:
BioPerl wrappers: scripts
Contains scripts from the BioPerl-Run package. This package will also install all wrappable applications packaged in Debian. The ones that are not Free are "Suggested" by this package.
Other Packages Related to bioperl-run
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- dep: bioperl
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- dep: libbio-perl-run-perl (= 1.7.1-3)
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- dep: perl
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- rec: amap-align
- Protein multiple alignment by sequence annealing
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- rec: bedtools
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- rec: bowtie
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- rec: bwa
- Burrows-Wheeler Aligner
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- rec: clustalw
- global multiple nucleotide or peptide sequence alignment
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- rec: emboss
- European molecular biology open software suite
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- rec: exonerate
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- rec: hmmer
- profile hidden Markov models for protein sequence analysis
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- rec: hyphy-mpi
- Hypothesis testing using Phylogenies (MPI version)
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- rec: infernal
- inference of RNA secondary structural alignments
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- rec: kalign
- Global and progressive multiple sequence alignment
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- rec: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: maq
- maps short fixed-length polymorphic DNA sequence reads to reference sequences
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- rec: muscle
- Multiple alignment program of protein sequences
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- rec: phylip
- package of programs for inferring phylogenies
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- rec: phyml
- Phylogenetic estimation using Maximum Likelihood
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- rec: primer3
- tool to design flanking oligo nucleotides for DNA amplification
-
- rec: probalign
- multiple sequence alignment using partition function posterior probabilities
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- rec: probcons
- PROBabilistic CONSistency-based multiple sequence alignment
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- rec: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- rec: samtools
- processing sequence alignments in SAM and BAM formats
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- rec: sim4
- tool for aligning cDNA and genomic DNA
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- rec: t-coffee
- Multiple Sequence Alignment
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- rec: tigr-glimmer
- Gene detection in archea and bacteria
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- rec: wise
- comparison of biopolymers, like DNA and protein sequences
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- sug: gmap
- Package not available
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- sug: paml
- Package not available
Download bioperl-run
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 38.8 kB | 97 kB | [list of files] |