[ nabia ]
[ aramo ]
[ ソース: optimir ]
パッケージ: optimir (1.0-2)
optimir に関するリンク
Trisquel の資源:
optimir ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Dylan Aïssi
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
Integrating genetic variations in miRNA alignment
OptimiR is a miRSeq data alignment workflow. It integrates genetic information to assess the impact of variants on miRNA expression.
OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs, isomiRs and polymiRs from miRSeq data, & study the impact of genetic variations on polymiRs' expression.
その他の optimir 関連パッケージ
|
|
|
-
- dep: bowtie2
- ultrafast memory-efficient short read aligner
-
- dep: cutadapt
- Clean biological sequences from high-throughput sequencing reads
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biopython
- Python3 library for bioinformatics
-
- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- rec: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- rec: r-cran-gridextra
- GNU R package with extensions for the grid package