Pakiet: libseqlib1 (1.1.2+dfsg-6)
Odnośniki dla libseqlib1
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego libseqlib:
- [libseqlib_1.1.2+dfsg-6.dsc]
- [libseqlib_1.1.2+dfsg.orig.tar.xz]
- [libseqlib_1.1.2+dfsg-6.debian.tar.xz]
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Andreas Tille
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
Inne pakiety związane z libseqlib1
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
-
- dep: libfml0 (>= 0.1)
- library for assembling Illumina short reads in small regions
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
-
- dep: libjsoncpp1 (>= 1.7.4)
- library for reading and writing JSON for C++
-
- dep: libssw0 (>= 1.1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
-
- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Pobieranie libseqlib1
Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
---|---|---|---|
amd64 | 118,9 KiB | 404 KiB | [lista plików] |
armhf | 103,1 KiB | 278 KiB | [lista plików] |