Paket: libseqlib1 (1.1.2+dfsg-6)
Länkar för libseqlib1
Trisquelresurser:
Hämta källkodspaketet libseqlib:
- [libseqlib_1.1.2+dfsg-6.dsc]
- [libseqlib_1.1.2+dfsg.orig.tar.xz]
- [libseqlib_1.1.2+dfsg-6.debian.tar.xz]
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Andreas Tille
Externa resurser:
- Hemsida [github.com]
Liknande paket:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
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Hämta libseqlib1
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 118,9 kbyte | 404 kbyte | [filförteckning] |
armhf | 103,1 kbyte | 278 kbyte | [filförteckning] |