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Balík: velvet (1.2.10+dfsg1-7)

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Ostatné balíky súvisiace s balíkom velvet

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: zlib1g (>= 1:1.2.0.2)
    compression library - runtime

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Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
arm64 635.4 kB1209 kB [zoznam súborov]