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[ Källkod: covtobed  ]

Paket: covtobed (1.3.5+dfsg-1)

convert the coverage track from a BAM file into a BED file

Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range.

Andra paket besläktade med covtobed

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  • rekommenderar
  • föreslår
  • dep: bamtools
    toolkit for manipulating BAM (genome alignment) files
  • dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: zlib1g
    compression library - runtime

Hämta covtobed

Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
amd64 42,8 kbyte122 kbyte [filförteckning]