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[ 源代码: covtobed  ]

软件包: covtobed (1.3.5+dfsg-1)

convert the coverage track from a BAM file into a BED file

Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range.

其他与 covtobed 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: bamtools
    toolkit for manipulating BAM (genome alignment) files
  • dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: zlib1g
    compression library - runtime

下载 covtobed

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 42.8 kB122 kB [文件列表]