[ Källkod: python-pyfaidx ]
Paket: python3-pyfaidx (0.4.8.1-1)
Länkar för python3-pyfaidx
Trisquelresurser:
Hämta källkodspaketet python-pyfaidx:
- [python-pyfaidx_0.4.8.1-1.dsc]
- [python-pyfaidx_0.4.8.1.orig.tar.gz]
- [python-pyfaidx_0.4.8.1-1.debian.tar.xz]
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Andreas Tille
Externa resurser:
- Hemsida [github.com]
Liknande paket:
efficient random access to fasta subsequences for Python 3
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides the Python 3 modules to access fasta files.
Andra paket besläktade med python3-pyfaidx
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
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- dep: python3-six
- Python 2 and 3 compatibility library (Python 3 interface)
Hämta python3-pyfaidx
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 20,9 kbyte | 99 kbyte | [filförteckning] |