python-mdtraj-doc paketinin all aramo dosya listesi
/usr/share/doc/python-mdtraj-doc/README.md /usr/share/doc/python-mdtraj-doc/changelog.Debian.gz /usr/share/doc/python-mdtraj-doc/copyright /usr/share/doc/python-mdtraj-doc/examples/1vii_3frames.pdb /usr/share/doc/python-mdtraj-doc/examples/ala2.h5 /usr/share/doc/python-mdtraj-doc/examples/atom-selection.ipynb /usr/share/doc/python-mdtraj-doc/examples/centroids.ipynb /usr/share/doc/python-mdtraj-doc/examples/clustering.ipynb /usr/share/doc/python-mdtraj-doc/examples/hbonds.ipynb /usr/share/doc/python-mdtraj-doc/examples/iterload.ipynb /usr/share/doc/python-mdtraj-doc/examples/native-contact.ipynb /usr/share/doc/python-mdtraj-doc/examples/nmr.ipynb /usr/share/doc/python-mdtraj-doc/examples/principal-components.ipynb /usr/share/doc/python-mdtraj-doc/examples/ramachandran-plot.ipynb /usr/share/doc/python-mdtraj-doc/examples/rmsd-benchmark.ipynb /usr/share/doc/python-mdtraj-doc/examples/rmsd-drift.ipynb /usr/share/doc/python-mdtraj-doc/examples/simulation-with-openmm.ipynb /usr/share/doc/python-mdtraj-doc/examples/solvent-accessible-surface-area.ipynb /usr/share/doc/python-mdtraj-doc/examples/test_examples.py /usr/share/doc/python-mdtraj-doc/examples/two-pass-clustering.ipynb /usr/share/doc/python-mdtraj-doc/examples/data/2EQQ.pdb /usr/share/doc/python-mdtraj-doc/examples/data/2MI7.pdb /usr/share/doc/python-mdtraj-doc/examples/data/frame0.h5 /usr/share/doc/python-mdtraj-doc/examples/data/frame0.xtc /usr/share/doc/python-mdtraj-doc/examples/data/native.pdb /usr/share/doc/python-mdtraj-doc/html/analysis.html /usr/share/doc/python-mdtraj-doc/html/atom_selection.html /usr/share/doc/python-mdtraj-doc/html/building_docs.html /usr/share/doc/python-mdtraj-doc/html/faq.html /usr/share/doc/python-mdtraj-doc/html/genindex.html /usr/share/doc/python-mdtraj-doc/html/hdf5_format.html /usr/share/doc/python-mdtraj-doc/html/index.html /usr/share/doc/python-mdtraj-doc/html/installation.html /usr/share/doc/python-mdtraj-doc/html/load_functions.html /usr/share/doc/python-mdtraj-doc/html/mdconvert.html /usr/share/doc/python-mdtraj-doc/html/new_to_python.html /usr/share/doc/python-mdtraj-doc/html/objects.inv /usr/share/doc/python-mdtraj-doc/html/search.html /usr/share/doc/python-mdtraj-doc/html/searchindex.js /usr/share/doc/python-mdtraj-doc/html/whatsnew.html /usr/share/doc/python-mdtraj-doc/html/_sources/analysis.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/atom_selection.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/building_docs.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/faq.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/hdf5_format.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/index.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/installation.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/load_functions.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/mdconvert.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/new_to_python.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/whatsnew.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/reporters.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/trajectory_files.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/utils.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.Topology.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.Trajectory.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.Trajectory.superpose.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.acylindricity.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.asphericity.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.baker_hubbard.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.chemical_shifts_ppm.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.chemical_shifts_shiftx2.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.chemical_shifts_spartaplus.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_J3_HN_C.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_J3_HN_CB.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_J3_HN_HA.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_angles.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_center_of_mass.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_chi1.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_chi2.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_chi3.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_chi4.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_contacts.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_dihedrals.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_directors.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_displacements.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_distances.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_drid.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_dssp.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_gyration_tensor.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_inertia_tensor.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_neighbors.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_nematic_order.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_omega.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_phi.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_psi.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_rdf.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.compute_rg.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.density.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.dipole_moments.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.AmberNetCDFRestartFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.AmberRestartFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.ArcTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.BINPOSTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.DCDTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.DTRTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.GroTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.HDF5TrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.LAMMPSTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.LH5TrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.MDCRDTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.NetCDFTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.PDBTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.TRRTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.XTCTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.formats.XYZTrajectoryFile.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.geometry.squareform.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.isothermal_compressability_kappa_T.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.iterload.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.join.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.kabsch_sander.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_arc.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_binpos.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_dcd.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_dtr.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_frame.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_hdf5.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_hoomdxml.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_lammpstrj.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_lh5.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_netcdf.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_pdb.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_prmtop.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_trr.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_xml.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_xtc.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.load_xyz.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.lprmsd.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.open.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.principal_moments.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.reindex_dataframe_by_atoms.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.relative_shape_antisotropy.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.reporters.DCDReporter.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.reporters.HDF5Reporter.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.reporters.NetCDFReporter.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.rmsd.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.rmsf.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.shrake_rupley.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.static_dielectric.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.thermal_expansion_alpha_P.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.box_vectors_to_lengths_and_angles.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.check_random_state.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.ensure_type.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.ilen.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.import_.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.in_units_of.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.lengths_and_angles_to_box_vectors.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.rotation_matrix_from_quaternion.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.timing.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.utils.uniform_quaternion.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/api/generated/mdtraj.wernet_nilsson.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/atom-selection.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/centroids.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/clustering.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/hbonds.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/index.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/introduction.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/iterload.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/native-contact.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/nmr.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/openmm.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/pca.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/ramachandran-plot.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/rmsd-benchmark.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/solvent-accessible-surface-area.rst.txt /usr/share/doc/python-mdtraj-doc/html/_sources/examples/two-pass-clustering.rst.txt /usr/share/doc/python-mdtraj-doc/html/_static/basic.css /usr/share/doc/python-mdtraj-doc/html/_static/doctools.js /usr/share/doc/python-mdtraj-doc/html/_static/documentation_options.js /usr/share/doc/python-mdtraj-doc/html/_static/example-trajectoryview-data.json.gz /usr/share/doc/python-mdtraj-doc/html/_static/file.png /usr/share/doc/python-mdtraj-doc/html/_static/jquery.js /usr/share/doc/python-mdtraj-doc/html/_static/language_data.js /usr/share/doc/python-mdtraj-doc/html/_static/mdtraj_logo-small.png /usr/share/doc/python-mdtraj-doc/html/_static/mdtraj_logo.xcf.gz /usr/share/doc/python-mdtraj-doc/html/_static/minus.png /usr/share/doc/python-mdtraj-doc/html/_static/plus.png /usr/share/doc/python-mdtraj-doc/html/_static/pygments.css /usr/share/doc/python-mdtraj-doc/html/_static/searchtools.js /usr/share/doc/python-mdtraj-doc/html/_static/underscore.js /usr/share/doc/python-mdtraj-doc/html/_static/css/badge_only.css /usr/share/doc/python-mdtraj-doc/html/_static/css/jupyter.min.css /usr/share/doc/python-mdtraj-doc/html/_static/css/msmb.css /usr/share/doc/python-mdtraj-doc/html/_static/css/theme.css /usr/share/doc/python-mdtraj-doc/html/_static/doi-10.1016_j.bpj.2015.08.015-blue.svg/doi-10.1016_j.bpj.2015.08.015-blue.svg /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Bold.ttf /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Bold.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-BoldItalic.ttf /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-BoldItalic.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Italic.ttf /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Italic.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Regular.ttf /usr/share/doc/python-mdtraj-doc/html/_static/fonts/Lato-Regular.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/RobotoSlab-Bold.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/RobotoSlab-Regular.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/fonts/fontawesome-webfont.eot /usr/share/doc/python-mdtraj-doc/html/_static/fonts/fontawesome-webfont.svg /usr/share/doc/python-mdtraj-doc/html/_static/fonts/fontawesome-webfont.ttf /usr/share/doc/python-mdtraj-doc/html/_static/fonts/fontawesome-webfont.woff /usr/share/doc/python-mdtraj-doc/html/_static/fonts/fontawesome-webfont.woff2 /usr/share/doc/python-mdtraj-doc/html/_static/js/theme.js /usr/share/doc/python-mdtraj-doc/html/_static/js/versions.js /usr/share/doc/python-mdtraj-doc/html/api/reporters.html /usr/share/doc/python-mdtraj-doc/html/api/trajectory_files.html /usr/share/doc/python-mdtraj-doc/html/api/utils.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.Topology.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.Trajectory.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.Trajectory.superpose.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.acylindricity.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.asphericity.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.baker_hubbard.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.chemical_shifts_ppm.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.chemical_shifts_shiftx2.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.chemical_shifts_spartaplus.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_J3_HN_C.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_J3_HN_CB.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_J3_HN_HA.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_angles.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_center_of_mass.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_chi1.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_chi2.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_chi3.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_chi4.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_contacts.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_dihedrals.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_directors.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_displacements.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_distances.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_drid.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_dssp.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_gyration_tensor.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_inertia_tensor.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_neighbors.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_nematic_order.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_omega.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_phi.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_psi.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_rdf.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.compute_rg.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.density.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.dipole_moments.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.AmberNetCDFRestartFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.AmberRestartFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.ArcTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.BINPOSTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.DCDTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.DTRTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.GroTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.HDF5TrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.LAMMPSTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.LH5TrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.MDCRDTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.NetCDFTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.PDBTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.TRRTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.XTCTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.formats.XYZTrajectoryFile.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.geometry.squareform.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.isothermal_compressability_kappa_T.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.iterload.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.join.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.kabsch_sander.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_arc.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_binpos.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_dcd.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_dtr.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_frame.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_hdf5.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_hoomdxml.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_lammpstrj.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_lh5.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_netcdf.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_pdb.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_prmtop.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_trr.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_xml.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_xtc.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.load_xyz.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.lprmsd.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.open.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.principal_moments.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.reindex_dataframe_by_atoms.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.relative_shape_antisotropy.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.reporters.DCDReporter.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.reporters.HDF5Reporter.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.reporters.NetCDFReporter.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.rmsd.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.rmsf.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.shrake_rupley.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.static_dielectric.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.thermal_expansion_alpha_P.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.box_vectors_to_lengths_and_angles.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.check_random_state.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.ensure_type.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.ilen.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.import_.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.in_units_of.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.lengths_and_angles_to_box_vectors.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.rotation_matrix_from_quaternion.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.timing.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.utils.uniform_quaternion.html /usr/share/doc/python-mdtraj-doc/html/api/generated/mdtraj.wernet_nilsson.html /usr/share/doc/python-mdtraj-doc/html/examples/atom-selection.html /usr/share/doc/python-mdtraj-doc/html/examples/centroids.html /usr/share/doc/python-mdtraj-doc/html/examples/clustering.html /usr/share/doc/python-mdtraj-doc/html/examples/hbonds.html /usr/share/doc/python-mdtraj-doc/html/examples/index.html /usr/share/doc/python-mdtraj-doc/html/examples/introduction.html /usr/share/doc/python-mdtraj-doc/html/examples/iterload.html /usr/share/doc/python-mdtraj-doc/html/examples/native-contact.html /usr/share/doc/python-mdtraj-doc/html/examples/nmr.html /usr/share/doc/python-mdtraj-doc/html/examples/openmm.html /usr/share/doc/python-mdtraj-doc/html/examples/pca.html /usr/share/doc/python-mdtraj-doc/html/examples/ramachandran-plot.html /usr/share/doc/python-mdtraj-doc/html/examples/rmsd-benchmark.html /usr/share/doc/python-mdtraj-doc/html/examples/solvent-accessible-surface-area.html /usr/share/doc/python-mdtraj-doc/html/examples/two-pass-clustering.html /usr/share/doc-base/python-mdtraj-doc.mdtraj