Paket: lumpy-sv (0.3.1+dfsg-6)
lumpy-sv için bağlantılar
Trisquel Kaynakları:
lumpy-sv Kaynak Paketini İndir:
Geliştirici:
Original Maintainers:
- Debian Med Packaging Team (Posta Arşivi)
- Andreas Tille
- Nilesh Patra
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
general probabilistic framework for structural variant discovery
LUMPY, a novel SV discovery framework that naturally integrates multiple SV signals jointly across multiple samples. LUMPY yields improved sensitivity, especially when SV signal is reduced owing to either low coverage data or low intra-sample variant allele frequency.
lumpy-sv ile İlgili Diğer Paketler
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- dep: bamkit
- tools for common BAM file manipulations
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- dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
-
- dep: libgcc-s1 (>= 3.3.1) [armhf değil]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: libgzstream0 (>= 1.5+dfsg)
- provide functionality of zlib C-library in a C++ iostream
-
- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samblaster
- marks duplicates, extracts discordant/split reads
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: sambamba
- tools for working with SAM/BAM data
lumpy-sv indir
| Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|
| amd64 | 135,6 kB | 427 kB | [dosya listesi] |
| arm64 | 128,3 kB | 391 kB | [dosya listesi] |
| armhf | 186,4 kB | 445 kB | [dosya listesi] |
| ppc64el | 141,4 kB | 547 kB | [dosya listesi] |