Paket: physamp (1.1.0-1build1)

physamp için bağlantılar

Trisquel Kaynakları:

physamp Kaynak Paketini İndir:

Geliştirici:

Debian Med Packaging Team (Posta Arşivi)

Original Maintainers:

Debian Med Packaging Team (Posta Arşivi)
Andreas Tille
Julien Dutheil

Dış Kaynaklar:

Ana Sayfa [jydu.github.io]

Benzer paketler:

sample sequence alignment corresponding to phylogeny

The PhySamp package currently contains two programs: bppphysamp, which samples sequences according to their similarity, and bppalnoptim, which samples a sequence alignment by removing sequences in order to maximize the number of sites suitable for a given analysis. The bppalnoptim program has three running modes:

 * Interactive: the user will be iteratively proposed a set of choices
   for sequence removal, with their corresponding site gains. The
   procedure stops when the user does not want to remove more sequences,
   and the resulting filtered alignment is written.
 * Automatic: the user enters an a priori criterion for stopping
   the filtering procedure (for instance a minimum number of
   sequences to keep).
 * Diagnostic: this mode allows one to plot the trade-off curve, by
   showing the site gain as a function of the number of removed
   sequences.

physamp ile İlgili Diğer Paketler

bağımlılıklar

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önerilen

dep: libbpp-core4 (>= 2.4.1)

Bio++ Core library
dep: libbpp-phyl12 (>= 2.4.1)

Bio++ Phylogenetic library
dep: libbpp-seq12 (>= 2.4.1)

Bio++ Sequence library
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3

physamp indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	280,9 kB	533 kB	[dosya listesi]

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