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[ 源代码: seqmagick  ]

软件包: seqmagick (0.8.4-3)

seqmagick 的相关链接

seqmagick

Trisquel 的资源:

下载源码包 seqmagick:

维护者:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Étienne Mollier

外部的资源:

相似软件包:

imagemagick-like frontend to Biopython SeqIO

Seqmagick is a little utility to expose the file format conversion in BioPython in a convenient way.

Features include:

 * Modifying sequences:
   - Remove gaps
   - Reverse & reverse complement
   - Trim to a range of residues
   - Change case
   - Sort by length or ID
 * Displaying information about sequence files
 * Subsetting sequence files by:
   - Position
   - ID
   - Deduplication
 * Filtering sequences by quality score
 * Trimming alignments to a region of interest defined by the forward
   and reverse primers

其他与 seqmagick 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biopython
    Python3 library for bioinformatics
  • dep: python3-pygtrie
    Python library implementing a trie data structure (Python 3)

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