[ aramo ]
[ 原始碼： yanagiba ]
套件： yanagiba (1.0.0-5)
yanagiba 的相關超連結
Trisquel 的資源：
下載原始碼套件 yanagiba：
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Nilesh Patra
- Pranav Ballaney
外部的資源：
- 主頁 [github.com]
相似套件：
filter low quality Oxford Nanopore reads basecalled with Albacore
Yanagiba is used to filter short or low quality Oxford Nanopore reads which have been basecalled with Albacore. It takes fastq.gz and an Albacore summary file as input. If no Albacore summary file is provided attempt to calculate mean qscore from directly from fastq file using NanoMath. Note: Calculated quality scores appear to be lower for reads called with Metrichor, you may need to lower your minqual setting in this case.
其他與 yanagiba 有關的套件
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-nanomath
- simple math function for other Oxford Nanopore processing scripts
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- dep: python3-pandas
- data structures for "relational" or "labeled" data