原始碼套件： snpeff (5.1+dfsg-2)

snpeff 的相關超連結

Trisquel 的資源：

• 報告問題
• Changelog
• 版權文件
• Debian 原始碼倉庫 (Git)

維護者：

• Debian Med Packaging Team (郵件存檔)

Original Maintainers:

• Debian Med Packaging Team (郵件存檔)
• Andreas Tille
• Pierre Gruet

外部的資源：

• 主頁 [pcingola.github.io]

libsnpeff-java

genetic variant annotation and effect prediction toolbox - lib

libsnpeff-java-doc

Documentation for Snp Effect

snpeff

genetic variant annotation and effect prediction toolbox - tool

其他與 snpeff 有關的套件

• adep: debhelper-compat (= 13)

  套件暫時不可用

• adep: javahelper

  Helper scripts for packaging Java programs

• adep: default-jdk

  Standard Java or Java compatible Development Kit

• adep: default-jdk-doc

  Standard Java or Java compatible Development Kit (documentation)

• adep: maven-debian-helper

  Helper tools for building Debian packages with Maven

• adep: libmaven-assembly-plugin-java

  Maven Assembly Plugin

• adep: libtrove3-java

  high performance collections for java

• adep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• adep: libbiojava5-java

  Java API to biological data and applications (version 5)

• adep: junit5

  JUnit regression test framework for Java

• adep: libcommons-codec-java

  encoder and decoders such as Base64 and hexadecimal codec

• adep: libcommons-io-java

  Common useful IO related classes

• adep: libcommons-cli-java

  Command line arguments and options parsing library

• adep: libcommons-math3-java

  Java lightweight mathematics and statistics components

• adep: libfreemarker-java

  template engine written in Java

• adep: libjaxb-api-java

  Java Architecture for XML Binding API

• adep: libmaven-javadoc-plugin-java

  Maven Javadoc Plugin

• adep: libcommons-codec-java-doc

  encoder and decoders such as Base64 and hexadecimal codec - documentation

• adep: libcommons-io-java-doc

  Common useful IO related classes - documentation

• adep: libcommons-math3-java-doc

  Java lightweight mathematics and statistics components - documentation

• adep: libfreemarker-java-doc

  template engine written in Java (documentation)

• adep: libhtsjdk-java-doc

  Documentation for the java HTSJDK library

• adep: libbiojava5-java-doc

  [Biology] Documentation for BioJava 5

• adep: libtrove3-java-doc

  high performance collections for java

• adep: libcharts4j-java

  free, lightweight charts and graphs Java API

• adep: libapfloat-java

  high performance arbitrary precision arithmetic library for Java

• adep: libdistlib-java

  Java library of statistical distribution functions

Download snpeff

Debian 套件原始碼倉庫(VCS: Git)

https://salsa.debian.org/med-team/snpeff.git

Debian 套件原始碼倉庫(可在線瀏覽)

https://salsa.debian.org/med-team/snpeff