Пакет: topp (2.6.0+cleaned1-3build1)

Връзки за topp

Ресурси за Trisquel:

Изтегляне на пакет-източник openms.

Отговорник:

The Debichem Group (Пощенски архив)

Original Maintainers:

The Debichem Group (Пощенски архив)
Filippo Rusconi

Външни препратки:

Начална страница [www.openms.de]

Подобни пакети:

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Други пакети, свързани с topp

зависимости

препоръчани

предложени

dep: libboost-regex1.74.0-icu70

виртуален пакет, предлаган от libboost-regex1.74.0
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libopenms2.6.0 (= 2.6.0+cleaned1-3build1)

library for LC/MS data management and analysis - runtime
dep: libqt5core5a (>= 5.11.3) [не amd64]

Qt 5 core module

dep: libqt5core5a (>= 5.15.1) [amd64]
dep: libqt5gui5 (>= 5.11.3)

Qt 5 GUI module

или libqt5gui5-gles (>= 5.11.3)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5widgets5 (>= 5.11.3)

Qt 5 widgets module
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: libxerces-c3.2

validating XML parser library for C++
dep: openms-common (= 2.6.0+cleaned1-3build1)

package for LC/MS data management and analysis - shared data

sug: openms-doc

package for LC/MS data management and analysis - documentation

Изтегляне на topp

Изтегляне за всички налични архитектури
Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	3 359,7 кБ	17986 кБ	[списък на файловете]
arm64	3 170,8 кБ	15506 кБ	[списък на файловете]
ppc64el	3 518,4 кБ	23766 кБ	[списък на файловете]

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