Paketti: srst2 (0.2.0-5)
Links for srst2
Trisquel-palvelut:
Imuroi lähdekoodipaketti srst2:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Kotisivu [katholt.github.io]
Samankaltaisia paketteja:
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Muut pakettiin srst2 liittyvät paketit
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: python-biopython
- Python library for bioinformatics (implemented in Python 2)
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- dep: python-scipy
- scientific tools for Python
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- dep: samtools
- processing sequence alignments in SAM and BAM formats
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- rec: python-rpy2
- Python 2 interface to the GNU R language and environment (version 2.8)
Imuroi srst2
Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
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amd64 | 59.1 kt | 258 kt | [tiedostoluettelo] |