[ 源代码: srst2 ]
软件包: srst2 (0.2.0-5)
srst2 的相关链接
Trisquel 的资源:
下载源码包 srst2:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
外部的资源:
- 主页 [katholt.github.io]
相似软件包:
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
其他与 srst2 有关的软件包
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: python-biopython
- Python library for bioinformatics (implemented in Python 2)
-
- dep: python-scipy
- scientific tools for Python
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- dep: samtools
- processing sequence alignments in SAM and BAM formats
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- rec: python-rpy2
- Python 2 interface to the GNU R language and environment (version 2.8)